› 1i46

Solution NMR

The solution structure of the mutant stem loop C 5'GUA3' triloop of brome mosaic virus (+) strand RNA

Released:
DOI: 10.2210/pdb1i46/pdb
PDB entry 1i46 coloured by chain, front view.
PDB entry 1i46 coloured by chain, side view.
PDB entry 1i46 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Structural and thermodynamic studies on mutant RNA motifs that impair the specificity between a viral replicase and its promoter.
Kim CH, Tinoco I
J Mol Biol 307 827-39 (2001)
PMID: 11273704

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196048 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-R(*GP*GP*UP*GP*CP*GP*UP*AP*GP*CP*AP*CP*C)-3' Chain: A
Molecule details ›
Chain: A
Length: 13 nucleotides
Theoretical weight: 4.17 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing molecular dynamics
Expression system: Not provided

Quick links

Citations

2 review citations

The coat protein leads the way: an update on basic and applied studies with the Brome mosaic virus coat protein.
Kao et al. (2011)
1 more

1 mention without citation

Comparative Study of Single-stranded Oligonucleotides Secondary Structure Prediction Tools.
Binet et al. (2023)