› 1it5

Solution NMR

Solution structure of apo-type PLA2 from Streptomyces violaceruber A-2688.

Released:
DOI: 10.2210/pdb1it5/pdb
PDB entry 1it5 coloured by chain, front view.
PDB entry 1it5 coloured by chain, side view.
PDB entry 1it5 coloured by chain, top view.
Source organism: Streptomyces violaceoruber
Primary publication:
A novel prokaryotic phospholipase A2. Characterization, gene cloning, and solution structure.
Sugiyama M, Ohtani K, Izuhara M, Koike T, Suzuki K, Imamura S, Misaki H
J Biol Chem 277 20051-8 (2002)
PMID: 11897786

Function and Biology Details

Reaction catalysed: 
Phosphatidylcholine + H(2)O = 1-acylglycerophosphocholine + a carboxylate
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-180414 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Phospholipase A2 Chain: A
Molecule details ›
Chain: A
Length: 122 amino acids
Theoretical weight: 13.57 KDa
Source organism: Streptomyces violaceoruber
Expression system: Escherichia coli
UniProt:
  • Canonical: Q6UV28 (Residues: 30-150; Coverage: 96%)
Sequence domains: Prokaryotic phospholipase A2
Structure domains: Phospholipase A2 domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Expression system: Escherichia coli

Quick links

Citations

5 review citations

The phospholipase A2 superfamily and its group numbering system.
Schaloske et al. (2006)
4 more

1 mention without citation

PhytAMP: a database dedicated to antimicrobial plant peptides.
Hammami et al. (2009)