› 1iyc

Solution NMR

Solution structure of antifungal peptide, scarabaecin

Released:
DOI: 10.2210/pdb1iyc/pdb
PDB entry 1iyc coloured by chain, ensemble of 20 models, front view.
PDB entry 1iyc coloured by chain, ensemble of 20 models, side view.
PDB entry 1iyc coloured by chain, ensemble of 20 models, top view.
Source organism: Oryctes rhinoceros
Primary publication:
Structural basis for new pattern of conserved amino acid residues related to chitin-binding in the antifungal peptide from the coconut rhinoceros beetle Oryctes rhinoceros.
Hemmi H, Ishibashi J, Tomie T, Yamakawa M
J Biol Chem 278 22820-7 (2003)
PMID: 12676931

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domain:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183148 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Scarabaecin Chain: A
Molecule details ›
Chain: A
Length: 36 amino acids
Theoretical weight: 4.09 KDa
Source organism: Oryctes rhinoceros
Expression system: Not provided
UniProt:
  • Canonical: Q86SC0 (Residues: 29-64; Coverage: 90%)
Gene name: scar

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: distance geometry, simulated annealing
Expression system: Not provided

Quick links

Citations

1 review citation

Insights into the anti-microbial defense of marine invertebrates: the penaeid shrimps and the oyster Crassostrea gigas.
Bachère et al. (2004)
4 other articles

1 mention without citation

How does averaging affect protein structure comparison on the ensemble level?
Zagrovic et al. (2004)