› 1js7

Solution NMR

Solution Structure of dAAUAA DNA Bulge

Released:
DOI: 10.2210/pdb1js7/pdb
PDB entry 1js7 coloured by chain, ensemble of 15 models, front view.
PDB entry 1js7 coloured by chain, ensemble of 15 models, side view.
PDB entry 1js7 coloured by chain, ensemble of 15 models, top view.
Source organism: Synthetic construct
Primary publication:
Solution structure of dAATAA and dAAUAA DNA bulges.
Gollmick FA, Lorenz M, Dornberger U, von Langen J, Diekmann S, Fritzsche H
Nucleic Acids Res 30 2669-77 (2002)
PMID: 12060684

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-114026 (preferred)
Entry contents:
2 distinct DNA molecules
Macromolecules (2 distinct):
5'-D(*GP*CP*AP*TP*CP*GP*AP*AP*UP*AP*AP*GP*CP*TP*AP*CP*G)-3' Chain: A
Molecule details ›
Chain: A
Length: 17 nucleotides
Theoretical weight: 5.21 KDa
Source organism: Synthetic construct
Expression system: Not provided
5'-D(*CP*GP*TP*AP*GP*CP*CP*GP*AP*TP*GP*C)-3' Chain: B
Molecule details ›
Chain: B
Length: 12 nucleotides
Theoretical weight: 3.66 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: matrix relaxation, torsion angle dynamics, ENERGY MINIMIZATION
Expression system: Not provided

Quick links

Citations

7 citation in other articles

Nucleosome positioning determinants.
Fernandez et al. (2007)
6 more

1 mention without citation

Solution structure of dAATAA and dAAUAA DNA bulges.
Gollmick et al. (2002)