› 1kkv

Solution NMR

NMR Solution Structure of d(CCACGCGTGG)2, parent to G-T mismatch structure

Released:
DOI: 10.2210/pdb1kkv/pdb
PDB entry 1kkv coloured by chain, ensemble of 20 models, front view.
PDB entry 1kkv coloured by chain, ensemble of 20 models, side view.
PDB entry 1kkv coloured by chain, ensemble of 20 models, top view.
Source organism: Synthetic construct
Primary publication:
Structural differences in the NOE-derived structure of G-T mismatched DNA relative to normal DNA are correlated with differences in (13)C relaxation-based internal dynamics.
Isaacs RJ, Rayens WS, Spielmann HP
J Mol Biol 319 191-207 (2002)
PMID: 12051946

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-114084 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
5'-D(*CP*CP*AP*CP*GP*CP*GP*TP*GP*G)-3' Chains: A, B
Molecule details ›
Chains: A, B
Length: 10 nucleotides
Theoretical weight: 3.05 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Not provided

Quick links

Citations

5 review citations

Structure and mechanism for DNA lesion recognition.
Yang W. (2008)
4 more