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Solution NMR

SOLUTION STRUCTURE OF THE LEAD-DEPENDENT RIBOZYME, NMR, 25 STRUCTURES

Released:
DOI: 10.2210/pdb1ldz/pdb
PDB entry 1ldz coloured by chain, ensemble of 25 models, front view.
PDB entry 1ldz coloured by chain, ensemble of 25 models, side view.
PDB entry 1ldz coloured by chain, ensemble of 25 models, top view.
Source organism: Synthetic construct
Primary publication:
NMR solution structure of the lead-dependent ribozyme: evidence for dynamics in RNA catalysis.
Hoogstraten CG, Legault P, Pardi A
J Mol Biol 284 337-50 (1998)
PMID: 9813122

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196105 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
LEAD-DEPENDENT RIBOZYME Chain: A
Molecule details ›
Chain: A
Length: 30 nucleotides
Theoretical weight: 9.76 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: SIMULATED ANNEALING FROM RANDOM TORSION ANGLES
Expression system: Not provided

Quick links

Citations

8 review citations

Stitching together RNA tertiary architectures.
Hermann et al. (1999)
7 more

6 mentions without citation

Development of constant-pH simulation methods in implicit solvent and applications in biomolecular systems.
Barroso daSilva et al. (2017)
5 more