› 1m4x

Electron Microscopy
28Å resolution

PBCV-1 virus capsid, quasi-atomic model

Released:
DOI: 10.2210/pdb1m4x/pdb
PDB entry 1m4x coloured by chain, front view.
PDB entry 1m4x coloured by chain, side view.
PDB entry 1m4x coloured by chain, top view.
Source organism: Paramecium bursaria Chlorella virus 1
Primary publication:
The structure and evolution of the major capsid protein of a large, lipid-containing DNA virus.
Nandhagopal N, Simpson AA, Gurnon JR, Yan X, Baker TS, Graves MV, Van Etten JL, Rossmann MG
Proc Natl Acad Sci U S A 99 14758-63 (2002)
PMID: 12411581

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo 5040-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-151709 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Major capsid protein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 413 amino acids
Theoretical weight: 45.73 KDa
Source organism: Paramecium bursaria Chlorella virus 1
UniProt:
  • Canonical: P30328 (Residues: 25-437; Coverage: 95%)
Gene name: A430L
Sequence domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 28Å

Quick links

Citations

39 review citations

Evolutionary genomics of nucleo-cytoplasmic large DNA viruses.
Iyer et al. (2006)
38 more

10 mentions without citation

Polintons: a hotbed of eukaryotic virus, transposon and plasmid evolution.
Krupovic et al. (2015)
9 more