› 1m65

X-ray diffraction
1.57Å resolution

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160022 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Probable phosphatase YcdX Chain: A
Molecule details ›
Chain: A
Length: 245 amino acids
Theoretical weight: 26.93 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P75914 (Residues: 1-245; Coverage: 100%)
Gene names: JW1017, b1034, ycdX
Sequence domains: PHP domain
Structure domains: Metal-dependent hydrolases

Ligands and Environments

3 bound ligands:
Ligand ZN 1 x ZN
Ligand NA 3 x NA
Ligand SO4 1 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: P321
Unit cell:
a: 77.23Å b: 77.23Å c: 79.99Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.178 0.177 0.208
Expression system: Escherichia coli BL21

Quick links

Citations

2 review citations

DNA replicases from a bacterial perspective.
McHenry CS. (2011)
1 more

9 mentions without citation

Discrete-continuous duality of protein structure space.
Sadreyev et al. (2009)
8 more