› 1mv1

Solution NMR

The Tandem, Sheared PA Pairs in 5'(rGGCPAGCCU)2

Released:
DOI: 10.2210/pdb1mv1/pdb
PDB entry 1mv1 coloured by chain, front view.
PDB entry 1mv1 coloured by chain, side view.
PDB entry 1mv1 coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Molecular recognition in purine-rich internal loops: thermodynamic, structural, and dynamic consequences of purine for adenine substitutions in 5'(rGGCAAGCCU)2.
Znosko BM, Burkard ME, Krugh TR, Turner DH
Biochemistry 41 14978-87 (2002)
PMID: 12475247

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196127 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-R(*GP*GP*CP*(P5P)P*AP*GP*CP*CP*U)-3' Chains: A, B
Molecule details ›
Chains: A, B
Length: 9 nucleotides
Theoretical weight: 2.86 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
1 modified residue:
Ligand P5P 2 x P5P

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing, energy minimization
Expression system: Not provided

Quick links

Citations

5 citation in other articles

A set of nearest neighbor parameters for predicting the enthalpy change of RNA secondary structure formation.
Lu et al. (2006)
4 more