1njr

X-ray diffraction
1.9Å resolution

Crystal structure of yeast ymx7, an ADP-ribose-1''-monophosphatase

Released:

Function and Biology Details

Reaction catalysed:
ADP-D-ribose 1''-phosphate + H(2)O = ADP-D-ribose + phosphate
Biochemical function:
Cellular component:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
PDBe Complex ID:
PDB-CPX-170015 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Probable ADP-ribose 1''-phosphate phosphatase YML087W Chain: A
Molecule details ›
Chain: A
Length: 284 amino acids
Theoretical weight: 32.58 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: Q04299 (Residues: 1-284; Coverage: 100%)
Gene names: YM9582.12, YMR087W
Sequence domains: Macro-like domain
Structure domains: Leucine Aminopeptidase, subunit E, domain 1

Ligands and Environments

1 bound ligand:
1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X25
Spacegroup: C2
Unit cell:
a: 107.694Å b: 38.149Å c: 64.736Å
α: 90° β: 112.21° γ: 90°
R-values:
R R work R free
0.206 0.206 0.23
Expression system: Escherichia coli