› 1ny1

X-ray diffraction
1.8Å resolution

CRYSTAL STRUCTURE OF B. SUBTILIS POLYSACCHARIDE DEACETYLASE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SR127.

Released:
DOI: 10.2210/pdb1ny1/pdb
PDB entry 1ny1 coloured by chain, front view.
PDB entry 1ny1 coloured by chain, side view.
PDB entry 1ny1 coloured by chain, top view.
Source organism: Bacillus subtilis
Entry authors: Forouhar F, Edstrom W, Khan J, Ma L, Chiang Y, Acton TB, Montelione GT, Hunt JF, Tong L, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-128626 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Peptidoglycan-N-acetylmuramic acid deacetylase PdaA Chains: A, B
Molecule details ›
Chains: A, B
Length: 240 amino acids
Theoretical weight: 28.02 KDa
Source organism: Bacillus subtilis
Expression system: Escherichia coli
UniProt:
  • Canonical: O34928 (Residues: 24-263; Coverage: 100%)
Gene names: BSU07980, pdaA, yfjS
Sequence domains: Polysaccharide deacetylase
Structure domains: Glycoside hydrolase/deacetylase

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 8 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4A
Spacegroup: P65
Unit cell:
a: 88.112Å b: 88.112Å c: 120.645Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.182 0.182 0.212
Expression system: Escherichia coli

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