› 1og6

X-ray diffraction
2.8Å resolution

ydhF, an aldo-keto reductase from E.coli complexed with NADPH

Released:
DOI: 10.2210/pdb1og6/pdb
PDB entry 1og6 coloured by chain, front view.
PDB entry 1og6 coloured by chain, side view.
PDB entry 1og6 coloured by chain, top view.
Source organism: Escherichia coli K-12
Entry authors: Jeudy S, Abergel C, Claverie JM

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160062 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Oxidoreductase YdhF Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 298 amino acids
Theoretical weight: 33.65 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P76187 (Residues: 1-298; Coverage: 100%)
Gene names: JW1639, b1647, ydhF
Sequence domains: Aldo/keto reductase family
Structure domains: NADP-dependent oxidoreductase domain

Ligands and Environments

1 bound ligand:
Ligand NAP 3 x NAP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID14-2
Spacegroup: R3
Unit cell:
a: 174.529Å b: 174.529Å c: 97.923Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.207 0.207 0.238
Expression system: Escherichia coli BL21(DE3)

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