› 1oz9

X-ray diffraction
1.89Å resolution

Crystal structure of AQ_1354, a hypothetical protein from Aquifex aeolicus

Released:
DOI: 10.2210/pdb1oz9/pdb
PDB entry 1oz9 coloured by chain, front view.
PDB entry 1oz9 coloured by chain, side view.
PDB entry 1oz9 coloured by chain, top view.
Source organism: Aquifex aeolicus
Primary publication:
Structure of the hypothetical protein AQ_1354 from Aquifex aeolicus.
Oganesyan V, Busso D, Brandsen J, Chen S, Jancarik J, Kim R, Kim SH
Acta Crystallogr D Biol Crystallogr 59 1219-23 (2003)
PMID: 12832766

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130487 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Endoribonuclease YbeY Chain: A
Molecule details ›
Chain: A
Length: 150 amino acids
Theoretical weight: 17.37 KDa
Source organism: Aquifex aeolicus
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: O67367 (Residues: 1-150; Coverage: 100%)
Gene names: aq_1354, ybeY
Sequence domains: Endoribonuclease YbeY
Structure domains: Metalloproteases ("zincins"), catalytic domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 5.0.2
Spacegroup: P43212
Unit cell:
a: 58.018Å b: 58.018Å c: 110.255Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.215 0.205 0.234
Expression system: Escherichia coli BL21

Quick links

Citations

2 review citations

Structure-based inference of molecular functions of proteins of unknown function from Berkeley Structural Genomics Center.
Shin et al. (2007)
1 more

9 mentions without citation

Analysis of and function predictions for previously conserved hypothetical or putative proteins in Blochmannia floridanus.
Gaudermann et al. (2006)
8 more