› 1p7v

X-ray diffraction
1.08Å resolution

Structure of a complex formed between Proteinase K and a designed heptapeptide inhibitor Pro-Ala-Pro-Phe-Ala-Ala-Ala at atomic resolution

Released:
DOI: 10.2210/pdb1p7v/pdb
PDB entry 1p7v coloured by chain, front view.
PDB entry 1p7v coloured by chain, side view.
PDB entry 1p7v coloured by chain, top view.
Source organism: Parengyodontium album
Entry authors: Bilgrami S, Kaur P, Chandra V, Banumathi S, Perbandt M, Betzel C, Singh TP

Function and Biology Details

Reaction catalysed: 
Hydrolysis of keratin, and of other proteins with subtilisin-like specificity. Hydrolyzes peptide amides.
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-139277 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Proteinase K Chain: A
Molecule details ›
Chain: A
Length: 279 amino acids
Theoretical weight: 28.96 KDa
Source organism: Parengyodontium album
UniProt:
  • Canonical: P06873 (Residues: 106-384; Coverage: 76%)
Gene name: PROK
Sequence domains: Subtilase family
Structure domains: Peptidase S8/S53 domain
inhibitor peptide Chain: B
Molecule details ›
Chain: B
Length: 7 amino acids
Theoretical weight: 644 Da
Source organism: Parengyodontium album
Expression system: Not provided

Ligands and Environments

2 bound ligands:
Ligand CA 2 x CA
Ligand NO3 3 x NO3
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X11
Spacegroup: P43212
Unit cell:
a: 67.72Å b: 67.72Å c: 101.62Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.12 0.12 0.14
Expression system: Not provided

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