› 1pgv

X-ray diffraction
1.8Å resolution

Structural Genomics of Caenorhabditis elegans: tropomodulin C-terminal domain

Released:
DOI: 10.2210/pdb1pgv/pdb
PDB entry 1pgv coloured by chain, front view.
PDB entry 1pgv coloured by chain, side view.
PDB entry 1pgv coloured by chain, top view.
Source organism: Caenorhabditis elegans
Primary publication:
Structural genomics of Caenorhabditis elegans: crystal structure of the tropomodulin C-terminal domain.
Lu S, Symersky J, Li S, Carson M, Chen L, Meehan E, Luo M
Proteins 56 384-6 (2004)
PMID: 15211521

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-126407 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Tropomodulin Chain: A
Molecule details ›
Chain: A
Length: 197 amino acids
Theoretical weight: 22.39 KDa
Source organism: Caenorhabditis elegans
Expression system: Escherichia coli
UniProt:
  • Canonical: O01479 (Residues: 197-392; Coverage: 50%)
Gene names: C06A5.7, tmd-1, unc-94
Structure domains: Ribonuclease Inhibitor

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: P212121
Unit cell:
a: 31.706Å b: 50.621Å c: 107.132Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.209 0.209 0.234
Expression system: Escherichia coli

Quick links

Citations

4 review citations

Tropomodulins: pointed-end capping proteins that regulate actin filament architecture in diverse cell types.
Yamashiro et al. (2012)
3 more

3 mentions without citation

Comparative sequence analysis of leucine-rich repeats (LRRs) within vertebrate toll-like receptors.
Matsushima et al. (2007)
2 more