› 1pjy

Solution NMR

Solution structure of the HIV-1 frameshift inducing stem-loop RNA

Released:
DOI: 10.2210/pdb1pjy/pdb
PDB entry 1pjy coloured by chain, ensemble of 20 models, front view.
PDB entry 1pjy coloured by chain, ensemble of 20 models, side view.
PDB entry 1pjy coloured by chain, ensemble of 20 models, top view.
Source organism: Synthetic construct
Primary publication:
Solution structure of the HIV-1 frameshift inducing stem-loop RNA.
Staple DW, Butcher SE
Nucleic Acids Res 31 4326-31 (2003)
PMID: 12888491

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196165 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
HIV-1 frameshift inducing stem-loop Chain: A
Molecule details ›
Chain: A
Length: 22 nucleotides
Theoretical weight: 7.07 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: torsion angle molecular dynamics, Cartesian space simulated annealing and molecular dynamics, residual dipolar coupling
Expression system: Not provided

Quick links

Citations

7 review citations

Programmed ribosomal frameshifting in HIV-1 and the SARS-CoV.
Brierley et al. (2006)
6 more

7 mentions without citation

Stapled Peptides Inhibitors: A New Window for Target Drug Discovery.
Ali et al. (2019)
6 more