› 1q0v

Solution NMR

Solution Structure of Tandem UIMs of Vps27

Released:
DOI: 10.2210/pdb1q0v/pdb
PDB entry 1q0v coloured by chain, ensemble of 20 models, front view.
PDB entry 1q0v coloured by chain, ensemble of 20 models, side view.
PDB entry 1q0v coloured by chain, ensemble of 20 models, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
Solution structure of Vps27 UIM-ubiquitin complex important for endosomal sorting and receptor downregulation.
Swanson KA, Kang RS, Stamenova SD, Hicke L, Radhakrishnan I
EMBO J 22 4597-606 (2003)
PMID: 12970172

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-154097 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Vacuolar protein sorting-associated protein 27 Chain: A
Molecule details ›
Chain: A
Length: 81 amino acids
Theoretical weight: 9.37 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P40343 (Residues: 250-329; Coverage: 13%)
Gene names: DID7, GRD11, N2038, SSV17, VPL23, VPS27, VPT27, YNR006W
Sequence domains: Ubiquitin interaction motif
Structure domains: Helix Hairpins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: TORSION ANGLE DYNAMICS AND SIMULATED ANNEALING
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

19 review citations

The ubiquitin code.
Komander et al. (2012)
18 more

4 mentions without citation

Coarse-grained models for simulations of multiprotein complexes: application to ubiquitin binding.
Kim et al. (2008)
3 more