› 1q27

Solution NMR

NMR Solution Structure of DR0079: An hypothetical Nudix protein from D. radiodurans

Released:
DOI: 10.2210/pdb1q27/pdb
PDB entry 1q27 coloured by chain, ensemble of 10 models, front view.
PDB entry 1q27 coloured by chain, ensemble of 10 models, side view.
PDB entry 1q27 coloured by chain, ensemble of 10 models, top view.
Source organism: Deinococcus radiodurans
Primary publication:
Solution structure of hypothetical Nudix hydrolase DR0079 from extremely radiation-resistant Deinococcus radiodurans bacterium.
Buchko GW, Ni S, Holbrook SR, Kennedy MA
Proteins 56 28-39 (2004)
PMID: 15162484

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-193347 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nudix hydrolase DR_0079 Chain: A
Molecule details ›
Chain: A
Length: 171 amino acids
Theoretical weight: 19.3 KDa
Source organism: Deinococcus radiodurans
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9RY71 (Residues: 1-171; Coverage: 100%)
Gene name: DR_0079
Sequence domains: NUDIX domain
Structure domains: Nucleoside Triphosphate Pyrophosphohydrolase

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: torsion angle dynamics
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

3 citation in other articles

Homology modeling and substrate binding study of Nudix hydrolase Ndx1 from Thermos thermophilus HB8.
Zheng et al. (2005)
2 more

2 mentions without citation

Oncogenic Mutations in Armadillo Repeats 5 and 6 of β-Catenin Reduce Binding to APC, Increasing Signaling and Transcription of Target Genes.
Liu et al. (2020)
1 more