› 1qe7

Solution NMR

SOLUTION STRUCTURE OF A URACIL CONTAINING HAIRPIN DNA

Released:
DOI: 10.2210/pdb1qe7/pdb
PDB entry 1qe7 coloured by chain, ensemble of 10 models, front view.
PDB entry 1qe7 coloured by chain, ensemble of 10 models, side view.
PDB entry 1qe7 coloured by chain, ensemble of 10 models, top view.
Source organism: Synthetic construct
Primary publication:
Structural characterisation of a uracil containing hairpin DNA by NMR and molecular dynamics.
Ghosh M, Kumar NV, Varshney U, Chary KV
Nucleic Acids Res 27 3938-44 (1999)
PMID: 10481034

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-114436 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
URACIL CONTAINING HAIRPIN 22-MER DNA Chain: A
Molecule details ›
Chain: A
Length: 22 nucleotides
Theoretical weight: 6.72 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: RESTRAINED MOLECULAR DYNAMICS, ENERGY MINIMIZATION
Expression system: Not provided

Quick links

Citations

9 citation in other articles

Rigid spin-labeled nucleoside C: a nonperturbing EPR probe of nucleic acid conformation.
Cekan et al. (2008)
8 more

4 mentions without citation

Microscopic mechanics of hairpin DNA translocation through synthetic nanopores.
Comer et al. (2009)
3 more