› 1r4h

Solution NMR

NMR Solution structure of the IIIc domain of GB Virus B IRES Element

Released:
DOI: 10.2210/pdb1r4h/pdb
PDB entry 1r4h coloured by chain, front view.
PDB entry 1r4h coloured by chain, side view.
PDB entry 1r4h coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Mutational and structural analysis of stem-loop IIIC of the hepatitis C virus and GB virus B internal ribosome entry sites.
Rijnbrand R, Thiviyanathan V, Kaluarachchi K, Lemon SM, Gorenstein DG
J Mol Biol 343 805-17 (2004)
PMID: 15476802

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196185 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-R(*GP*GP*GP*CP*AP*AP*GP*CP*CP*C)-3' Chain: A
Molecule details ›
Chain: A
Length: 10 nucleotides
Theoretical weight: 3.22 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: distance geometry simulated annealing restrained molecular dynamics complete relaxation matrix
Expression system: Not provided

Quick links

Citations

12 review citations

Searching for IRES.
Baird et al. (2006)
11 more