› 1s34

Solution NMR

Solution structure of residues 907-929 from Rous Sarcoma Virus

Released:
DOI: 10.2210/pdb1s34/pdb
PDB entry 1s34 coloured by chain, ensemble of 15 models, front view.
PDB entry 1s34 coloured by chain, ensemble of 15 models, side view.
PDB entry 1s34 coloured by chain, ensemble of 15 models, top view.
Source organism: Synthetic construct
Primary publication:
Solution structure of the pseudo-5' splice site of a retroviral splicing suppressor.
Cabello-Villegas J, Giles KE, Soto AM, Yu P, Mougin A, Beemon KL, Wang YX
RNA 10 1388-98 (2004)
PMID: 15317975

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196201 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-R(*GP*GP*GP*GP*AP*GP*UP*GP*GP*UP*UP*UP*GP*UP*AP*UP*CP*CP*UP*UP*CP*CP*C)-3' Chain: A
Molecule details ›
Chain: A
Length: 23 nucleotides
Theoretical weight: 7.35 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: Simulated annealing. Refinement using torsion angle dynamics and the DELPHIC database
Expression system: Not provided

Quick links

Citations

3 review citations

Influence of RNA secondary structure on the pre-mRNA splicing process.
Buratti et al. (2004)
2 more

2 mentions without citation

Predicting 3D Structure, Flexibility, and Stability of RNA Hairpins in Monovalent and Divalent Ion Solutions.
Shi et al. (2015)
1 more