› 1sjk

Solution NMR

A DUPLEX DNA WITH AN ABASIC SITE IN A DA TRACT, ALPHA FORM, NMR, MINIMIZED AVERAGE STRUCTURE

Released:
DOI: 10.2210/pdb1sjk/pdb
PDB entry 1sjk coloured by chain, front view.
PDB entry 1sjk coloured by chain, side view.
PDB entry 1sjk coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Solution structure of a duplex DNA with an abasic site in a dA tract.
Wang KY, Parker SA, Goljer I, Bolton PH
Biochemistry 36 11629-39 (1997)
PMID: 9305952

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-114593 (preferred)
Entry contents:
2 distinct DNA molecules
Macromolecules (2 distinct):
DNA (5'-D(*CP*GP*CP*AP*AP*AP*AP*AP*TP*GP*CP*G)-3') Chain: A
Molecule details ›
Chain: A
Length: 12 nucleotides
Theoretical weight: 3.68 KDa
Source organism: Synthetic construct
Expression system: Not provided
DNA (5'-D(*CP*GP*CP*AP*TP*TP*ORPP*TP*TP*GP*CP*G)-3') Chain: B
Molecule details ›
Chain: B
Length: 12 nucleotides
Theoretical weight: 3.54 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Expression system: Not provided

Quick links

Citations

21 citation in other articles

Fine structure of E. coli RNA polymerase-promoter interactions: alpha subunit binding to the UP element minor groove.
Ross et al. (2001)
20 more