› 1ta9

X-ray diffraction
1.9Å resolution

Crystal structure of glycerol dehydrogenase from Schizosaccharomyces pombe

Released:
DOI: 10.2210/pdb1ta9/pdb
PDB entry 1ta9 coloured by chain, front view.
PDB entry 1ta9 coloured by chain, side view.
PDB entry 1ta9 coloured by chain, top view.
Source organism: Schizosaccharomyces pombe
Entry author: Mulichak AM

Function and Biology Details

Reaction catalysed: 
Glycerol + NAD(+) = glycerone + NADH
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo octamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-126910 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glycerol dehydrogenase 1 Chains: A, B
Molecule details ›
Chains: A, B
Length: 450 amino acids
Theoretical weight: 49.49 KDa
Source organism: Schizosaccharomyces pombe
UniProt:
  • Canonical: O13702 (Residues: 1-450; Coverage: 100%)
Gene names: SPAC13F5.03c, gld1
Sequence domains: Iron-containing alcohol dehydrogenase
Structure domains:

Ligands and Environments

4 bound ligands:
Ligand ZN 2 x ZN
Ligand K 2 x K
Ligand ALA 2 x ALA
Ligand GOL 3 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 5ID-B
Spacegroup: I4
Unit cell:
a: 105.98Å b: 105.98Å c: 140.63Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.186 0.186 0.209

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