› 1tc5

X-ray diffraction
1.93Å resolution

Structural Analysis of a probable eukaryotic D-amino acid tRNA deacylase

Released:
DOI: 10.2210/pdb1tc5/pdb
PDB entry 1tc5 coloured by chain, front view.
PDB entry 1tc5 coloured by chain, side view.
PDB entry 1tc5 coloured by chain, top view.
Source organism: Leishmania major
Entry authors: Robien MA, Hol WGJ, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160790 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative D-tyrosyl-tRNA(Tyr) deacylase 2 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 194 amino acids
Theoretical weight: 21.77 KDa
Source organism: Leishmania major
Expression system: Escherichia coli
UniProt:
  • Canonical: P84066 (Residues: 1-181; Coverage: 100%)
Sequence domains: D-Tyr-tRNA(Tyr) deacylase
Structure domains: D-tyrosyl-tRNA(Tyr) deacylase

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.2
Spacegroup: P2221
Unit cell:
a: 67.479Å b: 67.465Å c: 174.41Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.201 0.199 0.234
Expression system: Escherichia coli

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