› 1u0l

X-ray diffraction
2.8Å resolution

Crystal structure of YjeQ from Thermotoga maritima

Released:
DOI: 10.2210/pdb1u0l/pdb
PDB entry 1u0l coloured by chain, front view.
PDB entry 1u0l coloured by chain, side view.
PDB entry 1u0l coloured by chain, top view.
Source organism: Thermotoga maritima
Primary publication:
Crystal structure of YjeQ from Thermotoga maritima contains a circularly permuted GTPase domain.
Shin DH, Lou Y, Jancarik J, Yokota H, Kim R, Kim SH
Proc Natl Acad Sci U S A 101 13198-203 (2004)
PMID: 15331784

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-194862 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Small ribosomal subunit biogenesis GTPase RsgA Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 301 amino acids
Theoretical weight: 34.03 KDa
Source organism: Thermotoga maritima
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9X242 (Residues: 1-295; Coverage: 100%)
Gene names: TM_1717, rsgA, yjeQ
Sequence domains:
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand ZN 3 x ZN
Ligand GDP 3 x GDP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 5.0.2
Spacegroup: C2
Unit cell:
a: 142.819Å b: 114.798Å c: 77.088Å
α: 90° β: 105.72° γ: 90°
R-values:
R R work R free
0.225 0.218 0.284
Expression system: Escherichia coli

Quick links

Citations

7 review citations

Structure-function relationships of the G domain, a canonical switch motif.
Wittinghofer et al. (2011)
6 more

7 mentions without citation

Protein Assistants of Small Ribosomal Subunit Biogenesis in Bacteria.
Maksimova et al. (2022)
6 more