› 1v9m

X-ray diffraction
1.85Å resolution

Crystal structure of the C subunit of V-type ATPase from Thermus thermophilus

Released:
DOI: 10.2210/pdb1v9m/pdb
PDB entry 1v9m coloured by chain, front view.
PDB entry 1v9m coloured by chain, side view.
PDB entry 1v9m coloured by chain, top view.
Source organism: Thermus thermophilus
Primary publication:
Structure of the C subunit of V-type ATPase from Thermus thermophilus at 1.85 A resolution.
Numoto N, Kita A, Miki K
Acta Crystallogr D Biol Crystallogr 60 810-5 (2004)
PMID: 15103125

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-159959 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
V-type ATP synthase subunit C Chain: A
Molecule details ›
Chain: A
Length: 323 amino acids
Theoretical weight: 35.97 KDa
Source organism: Thermus thermophilus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P74902 (Residues: 1-323; Coverage: 100%)
Gene names: TTHA1275, atpC
Sequence domains: ATP synthase (C/AC39) subunit
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand GOL 2 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL45XU
Spacegroup: P21
Unit cell:
a: 41.79Å b: 83.806Å c: 48.567Å
α: 90° β: 113.86° γ: 90°
R-values:
R R work R free
0.202 0.202 0.228
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

2 review citations

Eukaryotic V-ATPase: novel structural findings and functional insights.
Marshansky et al. (2014)
1 more

3 mentions without citation

EM-fold: De novo folding of alpha-helical proteins guided by intermediate-resolution electron microscopy density maps.
Lindert et al. (2009)
2 more