› 1vcr

X-ray diffraction
9.5Å resolution

An icosahedral assembly of light-harvesting chlorophyll a/b protein complex from pea thylakoid membranes

Released:
DOI: 10.2210/pdb1vcr/pdb
PDB entry 1vcr coloured by chain, front view.
PDB entry 1vcr coloured by chain, side view.
PDB entry 1vcr coloured by chain, top view.
Source organism: Pisum sativum
Primary publication:
An icosahedral assembly of the light-harvesting chlorophyll a/b protein complex from pea chloroplast thylakoid membranes.
Hino T, Kanamori E, Shen JR, Kouyama T
Acta Crystallogr D Biol Crystallogr 60 803-9 (2004)
PMID: 15103124

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-139569 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Chlorophyll a-b binding protein AB80, chloroplastic Chain: A
Molecule details ›
Chain: A
Length: 232 amino acids
Theoretical weight: 24.94 KDa
Source organism: Pisum sativum
UniProt:
  • Canonical: P07371 (Residues: 38-269; Coverage: 86%)
Gene name: AB80
Sequence domains: Chlorophyll A-B binding protein

Ligands and Environments

2 bound ligands:
Ligand CLA 7 x CLA
Ligand CHL 5 x CHL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL41XU
Spacegroup: F23
Unit cell:
a: 360.646Å b: 360.646Å c: 360.646Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.379 0.379 0.353

Quick links

Citations

1 review citation

Membrane protein crystallization in amphiphile phases: practical and theoretical considerations.
Nollert P. (2005)
7 other articles

1 mention without citation

On the use of logarithmic scales for analysis of diffraction data.
Urzhumtsev et al. (2009)