› 1vcy

X-ray diffraction
2.6Å resolution

VVA2 isoform

Released:
DOI: 10.2210/pdb1vcy/pdb
PDB entry 1vcy coloured by chain, front view.
PDB entry 1vcy coloured by chain, side view.
PDB entry 1vcy coloured by chain, top view.
Source organism: Volvariella volvacea
Primary publication:
Crystal structures and electron micrographs of fungal volvatoxin A2.
Lin SC, Lo YC, Lin JY, Liaw YC
J Mol Biol 343 477-91 (2004)
PMID: 15451675

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-180413 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Delta-endotoxin CytB Chain: A
Molecule details ›
Chain: A
Length: 213 amino acids
Theoretical weight: 23.97 KDa
Source organism: Volvariella volvacea
UniProt:
  • Canonical: Q6USC4 (Residues: 1-217; Coverage: 98%)
Sequence domains: Bacillus thuringiensis toxin
Structure domains: Delta-endotoxin CytB-like

Ligands and Environments

1 bound ligand:
Ligand MLI 5 x MLI
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU300
Spacegroup: P4222
Unit cell:
a: 56.107Å b: 56.107Å c: 132.427Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.225 0.225 0.272

Quick links

Citations

5 review citations

Mode of action of Bacillus thuringiensis Cry and Cyt toxins and their potential for insect control.
Bravo et al. (2007)
4 more

1 mention without citation

Structural insights into Bacillus thuringiensis Cry, Cyt and parasporin toxins.
Xu et al. (2014)