› 1vds

X-ray diffraction
1.6Å resolution

The crystal structure of the tetragonal form of hen egg white lysozyme at 1.6 angstroms resolution in space

Released:
DOI: 10.2210/pdb1vds/pdb
PDB entry 1vds coloured by chain, front view.
PDB entry 1vds coloured by chain, side view.
PDB entry 1vds coloured by chain, top view.
Source organism: Gallus gallus
Entry authors: Aibara S, Suzuki A, Kidera A, Shibata K, Yamane T, DeLucas LJ, Hirose M

Function and Biology Details

Reaction catalysed: 
Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins
Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132831 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Lysozyme C Chain: A
Molecule details ›
Chain: A
Length: 129 amino acids
Theoretical weight: 14.33 KDa
Source organism: Gallus gallus
UniProt:
  • Canonical: P00698 (Residues: 19-147; Coverage: 100%)
Gene name: LYZ
Sequence domains: C-type lysozyme/alpha-lactalbumin family
Structure domains: Lysozyme

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU300
Spacegroup: P43212
Unit cell:
a: 79.192Å b: 79.192Å c: 37.933Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.189 0.185 0.219

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