› 1vmh

X-ray diffraction
1.31Å resolution

Crystal structure of an uncharacterized conserved protein yjbq/upf0047 family, ortholog yugu b.subtilis (ca_c0907) from clostridium acetobutylicum at 1.31 A resolution

Released:
DOI: 10.2210/pdb1vmh/pdb
PDB entry 1vmh coloured by chain, front view.
PDB entry 1vmh coloured by chain, side view.
PDB entry 1vmh coloured by chain, top view.
Source organism: Clostridium acetobutylicum
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-188926 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
YjbQ family protein Chain: A
Molecule details ›
Chain: A
Length: 144 amino acids
Theoretical weight: 16.08 KDa
Source organism: Clostridium acetobutylicum
Expression system: Escherichia coli
UniProt:
  • Canonical: Q97KL0 (Residues: 1-132; Coverage: 100%)
Gene name: CA_C0907
Sequence domains: Uncharacterised protein family UPF0047
Structure domains: YjbQ-like

Ligands and Environments

1 bound ligand:
Ligand NA 1 x NA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-1
Spacegroup: R3
Unit cell:
a: 79.406Å b: 79.406Å c: 50.688Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.159 0.157 0.185
Expression system: Escherichia coli

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