› 1vp4

X-ray diffraction
1.82Å resolution

Crystal structure of a putative aminotransferase (tm1131) from thermotoga maritima msb8 at 1.82 A resolution

Released:
DOI: 10.2210/pdb1vp4/pdb
PDB entry 1vp4 coloured by chain, front view.
PDB entry 1vp4 coloured by chain, side view.
PDB entry 1vp4 coloured by chain, top view.
Source organism: Thermotoga maritima MSB8
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-194725 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Aminotransferase class I/classII domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 425 amino acids
Theoretical weight: 49.08 KDa
Source organism: Thermotoga maritima MSB8
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9X0L5 (Residues: 1-413; Coverage: 100%)
Gene name: TM_1131
Sequence domains: Aminotransferase class I and II
Structure domains:

Ligands and Environments

4 bound ligands:
Ligand PLP 2 x PLP
Ligand UNL 2 x UNL
Ligand EDO 6 x EDO
Ligand FMT 27 x FMT
1 modified residue:
Ligand MSE 18 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.1
Spacegroup: P65
Unit cell:
a: 165.125Å b: 165.125Å c: 68.701Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.18 0.179 0.203
Expression system: Escherichia coli

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