› 1vph

X-ray diffraction
1.76Å resolution

CRYSTAL STRUCTURE OF a YbjQ-like protein of unknown function (SSO2532) FROM SULFOLOBUS SOLFATARICUS P2 AT 1.76 A RESOLUTION

Released:
DOI: 10.2210/pdb1vph/pdb
PDB entry 1vph coloured by chain, front view.
PDB entry 1vph coloured by chain, side view.
PDB entry 1vph coloured by chain, top view.
Source organism: Saccharolobus solfataricus P2
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-188990 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
YjbQ family protein Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 149 amino acids
Theoretical weight: 17.06 KDa
Source organism: Saccharolobus solfataricus P2
Expression system: Escherichia coli
UniProt:
  • Canonical: Q97VS8 (Residues: 1-137; Coverage: 100%)
Gene name: SSO2532
Sequence domains: Uncharacterised protein family UPF0047
Structure domains: YjbQ-like

Ligands and Environments

4 bound ligands:
Ligand K 4 x K
Ligand PO4 11 x PO4
Ligand CL 1 x CL
Ligand EDO 1 x EDO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P212121
Unit cell:
a: 79.86Å b: 92.18Å c: 114.13Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.191 0.189 0.222
Expression system: Escherichia coli

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