› 1vrb

X-ray diffraction
2.6Å resolution

Crystal structure of Putative asparaginyl hydroxylase (2636534) from Bacillus subtilis at 2.60 A resolution

Released:
DOI: 10.2210/pdb1vrb/pdb
PDB entry 1vrb coloured by chain, front view.
PDB entry 1vrb coloured by chain, side view.
PDB entry 1vrb coloured by chain, top view.
Source organism: Bacillus subtilis
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-155452 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative asparaginyl hydroxylase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 342 amino acids
Theoretical weight: 39.28 KDa
Source organism: Bacillus subtilis
Expression system: Escherichia coli
UniProt:
  • Canonical: P46327 (Residues: 1-330; Coverage: 100%)
Gene names: BSU39880, VE7D, yxaQ, yxbC
Sequence domains: JmjC domain
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand FE 4 x FE
1 modified residue:
Ligand MSE 28 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.1, ALS BEAMLINE 8.3.1
Spacegroup: P212121
Unit cell:
a: 47.3Å b: 104.66Å c: 286.61Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.224 0.221 0.272
Expression system: Escherichia coli

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