› 1vz6

X-ray diffraction
2.75Å resolution

Ornithine Acetyltransferase (ORF6 Gene Product - Clavulanic Acid Biosynthesis) from Streptomyces clavuligerus

Released:
DOI: 10.2210/pdb1vz6/pdb
PDB entry 1vz6 coloured by chain, front view.
PDB entry 1vz6 coloured by chain, side view.
PDB entry 1vz6 coloured by chain, top view.
Source organism: Streptomyces clavuligerus
Primary publication:
X-ray crystal structure of ornithine acetyltransferase from the clavulanic acid biosynthesis gene cluster.
Elkins JM, Kershaw NJ, Schofield CJ
Biochem J 385 565-73 (2005)
PMID: 15352873

Function and Biology Details

Reaction catalysed: 
N(2)-acetyl-L-ornithine + L-glutamate = L-ornithine + N-acetyl-L-glutamate
Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-143600 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glutamate N-acetyltransferase 2 Chains: A, B
Molecule details ›
Chains: A, B
Length: 393 amino acids
Theoretical weight: 41.65 KDa
Source organism: Streptomyces clavuligerus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P0DJQ5 (Residues: 1-393; Coverage: 100%)
Gene names: dclD, oat2
Sequence domains: ArgJ family
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand SO4 4 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SRS BEAMLINE PX14.1
Spacegroup: P212121
Unit cell:
a: 63.663Å b: 94.444Å c: 180.377Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.212 0.212 0.229
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

8 review citations

The enzymes of β-lactam biosynthesis.
Hamed et al. (2013)
7 more

5 mentions without citation

DOM-fold: a structure with crossing loops found in DmpA, ornithine acetyltransferase, and molybdenum cofactor-binding domain.
Cheng et al. (2005)
4 more