› 1wjx

X-ray diffraction
1.7Å resolution

Crystal sturucture of TT0801 from Thermus thermophilus

Released:
DOI: 10.2210/pdb1wjx/pdb
PDB entry 1wjx coloured by chain, front view.
PDB entry 1wjx coloured by chain, side view.
PDB entry 1wjx coloured by chain, top view.
Source organism: Thermus thermophilus
Primary publication:
Structural basis for functional mimicry of long-variable-arm tRNA by transfer-messenger RNA.
Bessho Y, Shibata R, Sekine S, Murayama K, Higashijima K, Hori-Takemoto C, Shirouzu M, Kuramitsu S, Yokoyama S
Proc Natl Acad Sci U S A 104 8293-8 (2007)
PMID: 17488812

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-186030 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
SsrA-binding protein Chain: A
Molecule details ›
Chain: A
Length: 122 amino acids
Theoretical weight: 14.05 KDa
Source organism: Thermus thermophilus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q8RR57 (Residues: 2-123; Coverage: 85%)
Gene names: TTHA0902, smpB
Sequence domains: SmpB protein
Structure domains: Small Protein B; Chain: A;

Ligands and Environments

1 bound ligand:
Ligand K 1 x K
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B1
Spacegroup: P65
Unit cell:
a: 74.676Å b: 74.676Å c: 47.038Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.224 0.224 0.229
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

21 review citations

Biology of trans-translation.
Keiler KC. (2008)
20 more

4 mentions without citation

Trans-translation exposed: understanding the structures and functions of tmRNA-SmpB.
Giudice et al. (2014)
3 more