› 1wsp

X-ray diffraction
2.9Å resolution

Crystal structure of axin dix domain

Released:
DOI: 10.2210/pdb1wsp/pdb
PDB entry 1wsp coloured by chain, front view.
PDB entry 1wsp coloured by chain, side view.
PDB entry 1wsp coloured by chain, top view.
Source organism: Rattus norvegicus
Entry authors: Shibata N, Hanamura T, Yamamoto R, Ueda Y, Yamamoto H, Kikuchi A, Higuchi Y

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130686 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Axin-1 Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 84 amino acids
Theoretical weight: 9.73 KDa
Source organism: Rattus norvegicus
Expression system: Escherichia coli
UniProt:
  • Canonical: O70239 (Residues: 744-827; Coverage: 10%)
Gene names: Axin, Axin1
Sequence domains: DIX domain
Structure domains: Ribosomal Protein L25; Chain P

Ligands and Environments

2 bound ligands:
Ligand HG 9 x HG
Ligand BEZ 1 x BEZ
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL41XU
Spacegroup: P61
Unit cell:
a: 92.13Å b: 92.13Å c: 85.54Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.246 0.246 0.311
Expression system: Escherichia coli

Quick links