› 1wts

Solution NMR

HELIX 45 (16S RRNA) FROM B. STEAROTHERMOPHILUS, NMR, MINIMIZED AVERAGE STRUCTURE

Released:
DOI: 10.2210/pdb1wts/pdb
PDB entry 1wts coloured by chain, front view.
PDB entry 1wts coloured by chain, side view.
PDB entry 1wts coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
The structure of a methylated tetraloop in 16S ribosomal RNA.
Rife JP, Moore PB
Structure 6 747-56 (1998)
PMID: 9655826

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196232 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA (5'-R(*GP*GP*AP*CP*CP*2MGP*GP*MA6P*MA6P*GP*GP*UP*CP*C)-3') Chain: A
Molecule details ›
Chain: A
Length: 14 nucleotides
Theoretical weight: 4.61 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
2 modified residues:
Ligand 2MG 1 x 2MG
Ligand MA6 2 x MA6

Experiments and Validation Details

Entry percentile scores
Refinement method: TORSIONAL ANGLE MOLECULAR DYNAMICS, MOLECULAR DYNAMICS
Expression system: Not provided

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Citations

4 review citations

The A-Z of bacterial translation inhibitors.
Wilson DN. (2009)
3 more

1 mention without citation

Evolutionary Origin and Conserved Structural Building Blocks of Riboswitches and Ribosomal RNAs: Riboswitches as Probable Target Sites for Aminoglycosides Interaction.
Mehdizadeh Aghdam et al. (2014)