› 1xwp

Solution NMR

Solution structure of AUCGCA loop

Released:
DOI: 10.2210/pdb1xwp/pdb
PDB entry 1xwp coloured by chain, front view.
PDB entry 1xwp coloured by chain, side view.
PDB entry 1xwp coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
NMR structures of double loops of an RNA aptamer against mammalian initiation factor 4A.
Sakamoto T, Oguro A, Kawai G, Ohtsu T, Nakamura Y
Nucleic Acids Res 33 745-54 (2005)
PMID: 15687383

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196247 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-R(*GP*GP*AP*GP*AP*UP*CP*GP*CP*AP*CP*UP*CP*CP*A)-3' Chain: A
Molecule details ›
Chain: A
Length: 15 nucleotides
Theoretical weight: 4.79 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Not provided

Quick links

Citations

2 review citations

RNA plasticity and selectivity applicable to therapeutics and novel biosensor development.
Nakamura et al. (2012)
1 more

1 mention without citation

NMR structures of double loops of an RNA aptamer against mammalian initiation factor 4A.
Sakamoto et al. (2005)