› 1xx7

X-ray diffraction
2.26Å resolution

Conserved hypothetical protein from Pyrococcus furiosus Pfu-403030-001

Released:
DOI: 10.2210/pdb1xx7/pdb
PDB entry 1xx7 coloured by chain, front view.
PDB entry 1xx7 coloured by chain, side view.
PDB entry 1xx7 coloured by chain, top view.
Source organism: Pyrococcus furiosus
Entry authors: Chen L, Tempel W, Habel J, Zhou W, Nguyen D, Chang S-H, Lee D, Kelley L-LC, Dillard BD, Liu Z-J, Bridger S, Eneh JC, Hopkins RC, Jenney Jr FE, Lee H-S, Li T, Poole II FL, Shah C, Sugar FJ, Adams MWW, Arendall III WB, Richardson JS, Richardson DC, Rose JP, Wang B-C, Southeast Collaboratory for Structural Genomics (SECSG)

Function and Biology Details

Reaction catalysed: 
A 2'-deoxyribonucleoside 5'-monophosphate + H(2)O = a 2'-deoxyribonucleoside + phosphate
Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-186472 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
5'-deoxynucleotidase Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 184 amino acids
Theoretical weight: 21.12 KDa
Source organism: Pyrococcus furiosus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8U3R1 (Residues: 2-176; Coverage: 99%)
Gene name: PF0395
Sequence domains: HD domain
Structure domains: Hypothetical protein af1432

Ligands and Environments

2 bound ligands:
Ligand NI 6 x NI
Ligand UNX 19 x UNX
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: P212121
Unit cell:
a: 98.073Å b: 111.335Å c: 125.984Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.201 0.2 0.246
Expression system: Escherichia coli

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