› 1yel

Solution NMR

Structure of the hypothetical Arabidopsis thaliana protein At1g16640.1

Released:
DOI: 10.2210/pdb1yel/pdb
PDB entry 1yel coloured by chain, ensemble of 20 models, front view.
PDB entry 1yel coloured by chain, ensemble of 20 models, side view.
PDB entry 1yel coloured by chain, ensemble of 20 models, top view.
Source organism: Arabidopsis thaliana
Primary publication:
Structure of the B3 domain from Arabidopsis thaliana protein At1g16640.
Waltner JK, Peterson FC, Lytle BL, Volkman BF
Protein Sci 14 2478-83 (2005)
PMID: 16081658

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-190382 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
B3 domain-containing protein At1g16640 Chain: A
Molecule details ›
Chain: A
Length: 104 amino acids
Theoretical weight: 12.18 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9FX77 (Residues: 1-102; Coverage: 76%)
Gene names: At1g16640, F19K19.7
Sequence domains: B3 DNA binding domain
Structure domains: DNA-binding pseudobarrel domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: Automated methods were used for backbone chemical shift assignment and iterative NOE refinement. Final structures were obtained by molecular dynamics in explicit solvent.
Expression system: Escherichia coli

Quick links

Citations

4 review citations

DNA-binding domains of plant-specific transcription factors: structure, function, and evolution.
Yamasaki et al. (2013)
3 more

11 mentions without citation

Evolution of the B3 DNA binding superfamily: new insights into REM family gene diversification.
Romanel et al. (2009)
10 more