› 1yoy

X-ray diffraction
2Å resolution

Predicted coding region AF1432 from Archaeoglobus Fulgidus

Released:
DOI: 10.2210/pdb1yoy/pdb
PDB entry 1yoy coloured by chain, front view.
PDB entry 1yoy coloured by chain, side view.
PDB entry 1yoy coloured by chain, top view.
Source organism: Archaeoglobus fulgidus DSM 4304
Entry authors: Midwest Center for Structural Genomics (MCSG), Lunin VV, Savchenko A, Joachimiak A

Function and Biology Details

Reaction catalysed: 
A 2'-deoxyribonucleoside 5'-monophosphate + H(2)O = a 2'-deoxyribonucleoside + phosphate
Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assemblies composition:
homo dimer (preferred)
homo hexamer
Assembly name:
PDBe Complex ID:
PDB-CPX-128070 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
5'-deoxynucleotidase Chain: A
Molecule details ›
Chain: A
Length: 175 amino acids
Theoretical weight: 20.02 KDa
Source organism: Archaeoglobus fulgidus DSM 4304
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O28840 (Residues: 1-173; Coverage: 100%)
Gene name: AF_1432
Sequence domains: HD domain
Structure domains: Hypothetical protein af1432

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-BM
Spacegroup: R32
Unit cell:
a: 131.799Å b: 131.799Å c: 58.178Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.186 0.184 0.236
Expression system: Escherichia coli BL21(DE3)

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