› 1yud

X-ray diffraction
2.7Å resolution

X-ray Crystal Structure of Protein SO0799 from Shewanella oneidensis. Northeast Structural Genomics Consortium Target SoR12.

Released:
DOI: 10.2210/pdb1yud/pdb
PDB entry 1yud coloured by chain, front view.
PDB entry 1yud coloured by chain, side view.
PDB entry 1yud coloured by chain, top view.
Source organism: Shewanella oneidensis MR-1
Entry authors: Kuzin AP, Vorobiev S, Chen Y, Forouhar F, Acton T, Ma L-C, Xiao R, Montelione GT, Tong L, Hunt JF, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-184410 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF985 domain-containing protein Chains: A, B, C, D, E, F, G, H, I, J
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J
Length: 170 amino acids
Theoretical weight: 19.75 KDa
Source organism: Shewanella oneidensis MR-1
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8EIN8 (Residues: 1-160; Coverage: 100%)
Gene name: SO_0799
Sequence domains: Cupin superfamily (DUF985)
Structure domains: Jelly Rolls

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 70 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4A
Spacegroup: P21
Unit cell:
a: 98.441Å b: 94.1Å c: 117.1Å
α: 90° β: 111.8° γ: 90°
R-values:
R R work R free
0.237 0.237 0.292
Expression system: Escherichia coli

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