› 1zru

X-ray diffraction
1.73Å resolution

structure of the lactophage p2 receptor binding protein in complex with glycerol

Released:
DOI: 10.2210/pdb1zru/pdb
PDB entry 1zru coloured by chain, front view.
PDB entry 1zru coloured by chain, side view.
PDB entry 1zru coloured by chain, top view.
Source organism: Lactococcus virus P2
Primary publication:
Receptor-binding protein of Lactococcus lactis phages: identification and characterization of the saccharide receptor-binding site.
Tremblay DM, Tegoni M, Spinelli S, Campanacci V, Blangy S, Huyghe C, Desmyter A, Labrie S, Moineau S, Cambillau C
J Bacteriol 188 2400-10 (2006)
PMID: 16547026

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:
Structure domains:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-180734 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Receptor binding protein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 264 amino acids
Theoretical weight: 28.67 KDa
Source organism: Lactococcus virus P2
Expression system: Escherichia coli K-12
UniProt:
  • Canonical: Q71AW2 (Residues: 1-264; Coverage: 100%)
Gene name: rbp
Sequence domains:
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand GOL 6 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID14-4
Spacegroup: P212121
Unit cell:
a: 81.106Å b: 92.057Å c: 145.725Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.175 0.175 0.197
Expression system: Escherichia coli K-12

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Citations

18 review citations

A common evolutionary origin for tailed-bacteriophage functional modules and bacterial machineries.
Veesler et al. (2011)
17 more

8 mentions without citation

Molecular Basis of Bacterial Host Interactions by Gram-Positive Targeting Bacteriophages.
Dunne et al. (2018)
7 more