› 1zub

Solution NMR

Solution Structure of the RIM1alpha PDZ Domain in Complex with an ELKS1b C-terminal Peptide

Released:
DOI: 10.2210/pdb1zub/pdb
PDB entry 1zub coloured by chain, ensemble of 20 models, front view.
PDB entry 1zub coloured by chain, ensemble of 20 models, side view.
PDB entry 1zub coloured by chain, ensemble of 20 models, top view.
Source organism: Rattus norvegicus
Primary publication:
Solution structure of the RIM1alpha PDZ domain in complex with an ELKS1b C-terminal peptide.
Lu J, Li H, Wang Y, Südhof TC, Rizo J
J Mol Biol 352 455-66 (2005)
PMID: 16095618

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-182415 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Regulating synaptic membrane exocytosis protein 1 Chain: A
Molecule details ›
Chain: A
Length: 114 amino acids
Theoretical weight: 12.24 KDa
Source organism: Rattus norvegicus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9JIR4 (Residues: 597-705; Coverage: 7%)
Gene names: Rim1, Rims1
Sequence domains: PDZ domain
Structure domains: Pdz3 Domain
ELKS/Rab6-interacting/CAST family member 1 Chain: B
Molecule details ›
Chain: B
Length: 11 amino acids
Theoretical weight: 1.29 KDa
Source organism: Rattus norvegicus
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q811U3 (Residues: 939-948; Coverage: 1%)
Gene names: Cast2, Elks, Erc1, Rab6ip2

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: torsion angle dynamics
Expression systems:
  • Escherichia coli
  • Escherichia coli BL21

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Citations

6 review citations

Molecular organization of the presynaptic active zone.
Schoch et al. (2006)
5 more

2 mentions without citation

Putting into practice domain-linear motif interaction predictions for exploration of protein networks.
Luck et al. (2011)
1 more