› 1zyb

X-ray diffraction
2.15Å resolution

Crystal structure of transcription regulator from Bacteroides thetaiotaomicron VPI-5482 at 2.15 A resolution

Released:
DOI: 10.2210/pdb1zyb/pdb
PDB entry 1zyb coloured by chain, front view.
PDB entry 1zyb coloured by chain, side view.
PDB entry 1zyb coloured by chain, top view.
Source organism: Bacteroides thetaiotaomicron VPI-5482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183583 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cyclic nucleotide-binding domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 232 amino acids
Theoretical weight: 27.21 KDa
Source organism: Bacteroides thetaiotaomicron VPI-5482
Expression system: Escherichia coli
UniProt:
  • Canonical: Q89ZS6 (Residues: 1-220; Coverage: 100%)
Gene name: BT_4300
Sequence domains:
Structure domains: Jelly Rolls

Ligands and Environments

1 bound ligand:
Ligand GOL 7 x GOL
1 modified residue:
Ligand MSE 6 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL1-5
Spacegroup: P6522
Unit cell:
a: 115.98Å b: 115.98Å c: 119.639Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.18 0.177 0.228
Expression system: Escherichia coli

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