› 1zzm

X-ray diffraction
1.8Å resolution

Crystal structure of YJJV, TATD Homolog from Escherichia coli k12, at 1.8 A resolution

Released:
DOI: 10.2210/pdb1zzm/pdb
PDB entry 1zzm coloured by chain, front view.
PDB entry 1zzm coloured by chain, side view.
PDB entry 1zzm coloured by chain, top view.
Source organism: Escherichia coli
Entry authors: Malashkevich VN, Xiang DF, Raushel FM, Almo SC, Burley SK, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-153880 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Uncharacterized metal-dependent hydrolase YjjV Chain: A
Molecule details ›
Chain: A
Length: 259 amino acids
Theoretical weight: 28.95 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P39408 (Residues: 1-259; Coverage: 100%)
Gene names: JW4341, b4378, yjjV
Sequence domains: TatD related DNase
Structure domains: Metal-dependent hydrolases

Ligands and Environments

2 bound ligands:
Ligand ZN 4 x ZN
Ligand P33 1 x P33
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X9A
Spacegroup: P21
Unit cell:
a: 47.186Å b: 45.007Å c: 57.824Å
α: 90° β: 100.75° γ: 90°
R-values:
R R work R free
0.171 0.171 0.231
Expression system: Escherichia coli BL21

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