› 285d

X-ray diffraction
2.5Å resolution

X-RAY AND SOLUTION STUDIES OF DNA OLIGOMERS AND IMPLICATIONS FOR THE STRUCTURAL BASIS OF A-TRACT-DEPENDENT CURVATURE

Released:
DOI: 10.2210/pdb285d/pdb
PDB entry 285d coloured by chain, front view.
PDB entry 285d coloured by chain, side view.
PDB entry 285d coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
X-ray and solution studies of DNA oligomers and implications for the structural basis of A-tract-dependent curvature.
Shatzky-Schwartz M, Arbuckle ND, Eisenstein M, Rabinovich D, Bareket-Samish A, Haran TE, Luisi BF, Shakked Z
J Mol Biol 267 595-623 (1997)
PMID: 9126841

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-115041 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
DNA (5'-D(*CP*GP*CP*AP*IP*AP*TP*(5CM)P*TP*GP*CP*G)-3') Chains: A, B
Molecule details ›
Chains: A, B
Length: 12 nucleotides
Theoretical weight: 3.66 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
1 modified residue:
Ligand 5CM 2 x 5CM

Experiments and Validation Details

Entry percentile scores
Spacegroup: P212121
Unit cell:
a: 24.4Å b: 40.215Å c: 65.268Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.206 not available not available
Expression system: Not provided

Quick links

Citations

7 review citations

Molecular dynamics simulation of nucleic acids.
Cheatham et al. (2000)
6 more