2akg

Solution NMR

Thallium form of the G-Quadruplex from Oxytricha Nova, d(G4T4G4)2

Released:
Source organism: Synthetic construct

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-115075 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3' Chains: A, B
Molecule details ›
Chains: A, B
Length: 12 nucleotides
Theoretical weight: 3.81 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: (1) distance geometry with simulated annealing; (2) torsion angle dynamics (2000 K for 60 ps with 15 fs timesteps); (3) cartesian dynamics (1000 K for 5 ps with 5 fs timesteps); (4) restrained molecular dynamics (100 cycles of 200 steps each)
Expression system: Not provided