› 2ap8

Solution NMR

Solution structure of bombinin H4 in DPC micelles

Released:
DOI: 10.2210/pdb2ap8/pdb
PDB entry 2ap8 coloured by chain, ensemble of 20 models, front view.
PDB entry 2ap8 coloured by chain, ensemble of 20 models, side view.
PDB entry 2ap8 coloured by chain, ensemble of 20 models, top view.
Source organism: Bombina variegata
Primary publication:
Structures of the glycine-rich diastereomeric peptides bombinin H2 and H4.
Zangger K, Gössler R, Khatai L, Lohner K, Jilek A
Toxicon 52 246-54 (2008)
PMID: 18586045

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160619 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Bombinin-H5 Chain: A
Molecule details ›
Chain: A
Length: 20 amino acids
Theoretical weight: 1.92 KDa
Source organism: Bombina variegata
Expression system: Not provided
UniProt:
  • Canonical: P82285 (Residues: 1-20; Coverage: 95%)

Ligands and Environments

No bound ligands
1 modified residue:
Ligand DIL 1 x DIL

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 44%
Refinement method: simulated annealing
Expression system: Not provided

Quick links

Citations

3 review citations

Physicochemical Features and Peculiarities of Interaction of AMP with the Membrane.
Pirtskhalava et al. (2021)
2 more

3 mentions without citation

Forcefield_PTM: Ab Initio Charge and AMBER Forcefield Parameters for Frequently Occurring Post-Translational Modifications.
Khoury et al. (2013)
2 more