› 2bic

Solution NMR

The solution structure of the recombinant elicitor protein PcF from the oomycete pathogen P. cactorum

Released:
DOI: 10.2210/pdb2bic/pdb
PDB entry 2bic coloured by chain, ensemble of 20 models, front view.
PDB entry 2bic coloured by chain, ensemble of 20 models, side view.
PDB entry 2bic coloured by chain, ensemble of 20 models, top view.
Source organism: Phytophthora cactorum
Primary publication:
Solution structure of the phytotoxic protein PcF: the first characterized member of the Phytophthora PcF toxin family.
Nicastro G, Orsomando G, Ferrari E, Manconi L, Desario F, Amici A, Naso A, Carpaneto A, Pertinhez TA, Ruggieri S, Spisni A
Protein Sci 18 1786-91 (2009)
PMID: 19554629

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-188230 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Phytotoxin PcF domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 52 amino acids
Theoretical weight: 5.62 KDa
Source organism: Phytophthora cactorum
Expression system: Komagataella phaffii GS115
UniProt:
  • Canonical: Q94FS7 (Residues: 22-73; Coverage: 100%)
Sequence domains: Phytotoxin PcF protein
Structure domains: Helix Hairpins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 56%
Refinement method: simulated annealing
Expression system: Komagataella phaffii GS115

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Citations

4 review citations

Recent developments in effector biology of filamentous plant pathogens.
Oliva et al. (2010)
3 more

2 mentions without citation

Solution structure of the phytotoxic protein PcF: the first characterized member of the Phytophthora PcF toxin family.
Nicastro et al. (2009)
1 more